python main.py Fig.4C_ABE8e-dNG-sg210-30GAA-2_S27_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNG-sg210-30GAA-2_S27_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNG-sg210-30GAA-3_S85_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNG-sg210-30GAA-3_S85_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNG-sg210-60GAA-1_S87_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNG-sg210-60GAA-1_S87_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNG-sg210-60GAA-2_S29_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNG-sg210-60GAA-2_S29_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNG-sg210-60GAA-3_S31_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNG-sg210-60GAA-3_S31_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNRCH-sg210-30GAA-1_S1_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNRCH-sg210-30GAA-1_S1_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNRCH-sg210-30GAA-2_S3_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNRCH-sg210-30GAA-2_S3_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNRCH-sg210-30GAA-3_S73_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNRCH-sg210-30GAA-3_S73_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNRCH-sg210-60GAA-1_S75_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNRCH-sg210-60GAA-1_S75_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNRCH-sg210-60GAA-2_S5_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNRCH-sg210-60GAA-2_S5_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dNRCH-sg210-60GAA-3_S7_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dNRCH-sg210-60GAA-3_S7_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dRY-sg210-30GAA-1_S49_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dRY-sg210-30GAA-1_S49_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dRY-sg210-30GAA-2_S51_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dRY-sg210-30GAA-2_S51_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dRY-sg210-30GAA-3_S97_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dRY-sg210-30GAA-3_S97_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dRY-sg210-60GAA-1_S99_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dRY-sg210-60GAA-1_S99_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dRY-sg210-60GAA-2_S53_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dRY-sg210-60GAA-2_S53_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
python main.py Fig.4C_ABE8e-dRY-sg210-60GAA-3_S55_L001_R1_001.fastq.gz out/Fig.4C_ABE8e-dRY-sg210-60GAA-3_S55_L001_R1_001 -a ACTAACCTGGCCAACATGGTGAAACCCAGTATCTACTAAAAAATACAAAAAAAAAAAAAAAA(GAA|GRR)AATAAAGAAAAGTTAGCCGGGCGTGGTGTCGCGCGCCTGTAATCCCAGCTACTCCAGAGGCTGCGGCAGGAGAATCGCTTGAGCCCGGGAGGCAGAGGTTGCATTAA -rc --no_trim
